Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HmgclP38060 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HmgclP38060 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HmgclP38060 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HmgclP38060 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.31■□□□□ 0.84
HmgclP38060 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HmgclP38060 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HmgclP38060 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HmgclP38060 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HmgclP38060 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.3■□□□□ 0.84
HmgclP38060 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HmgclP38060 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HmgclP38060 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HmgclP38060 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.3■□□□□ 0.84
HmgclP38060 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HmgclP38060 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HmgclP38060 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HmgclP38060 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HmgclP38060 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HmgclP38060 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HmgclP38060 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HmgclP38060 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HmgclP38060 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HmgclP38060 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.28■□□□□ 0.84
HmgclP38060 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.28■□□□□ 0.84
HmgclP38060 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HmgclP38060 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HmgclP38060 Gm45102-201ENSMUST00000207427 857 ntBASIC20.28■□□□□ 0.84
HmgclP38060 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HmgclP38060 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HmgclP38060 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HmgclP38060 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HmgclP38060 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HmgclP38060 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HmgclP38060 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HmgclP38060 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HmgclP38060 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HmgclP38060 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HmgclP38060 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HmgclP38060 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.27■□□□□ 0.84
HmgclP38060 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HmgclP38060 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HmgclP38060 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HmgclP38060 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HmgclP38060 Gm7143-201ENSMUST00000222811 859 ntBASIC20.26■□□□□ 0.83
HmgclP38060 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HmgclP38060 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
HmgclP38060 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HmgclP38060 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HmgclP38060 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HmgclP38060 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HmgclP38060 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HmgclP38060 Rps24-207ENSMUST00000224568 714 ntBASIC20.24■□□□□ 0.83
HmgclP38060 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HmgclP38060 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HmgclP38060 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HmgclP38060 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HmgclP38060 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HmgclP38060 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HmgclP38060 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HmgclP38060 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HmgclP38060 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HmgclP38060 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.23■□□□□ 0.83
HmgclP38060 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HmgclP38060 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HmgclP38060 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HmgclP38060 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HmgclP38060 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HmgclP38060 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HmgclP38060 Gm14117-201ENSMUST00000122417 843 ntBASIC20.22■□□□□ 0.83
HmgclP38060 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HmgclP38060 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HmgclP38060 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HmgclP38060 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HmgclP38060 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.21■□□□□ 0.83
HmgclP38060 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.21■□□□□ 0.83
HmgclP38060 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HmgclP38060 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HmgclP38060 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HmgclP38060 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HmgclP38060 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HmgclP38060 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HmgclP38060 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HmgclP38060 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HmgclP38060 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HmgclP38060 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HmgclP38060 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HmgclP38060 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
HmgclP38060 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.2■□□□□ 0.82
HmgclP38060 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HmgclP38060 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms