Protein–RNA interactions for Protein: P34960

Mmp12, Macrophage metalloelastase, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp12P34960 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp12P34960 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.53■□□□□ 0.72
Mmp12P34960 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Mmp12P34960 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp12P34960 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp12P34960 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp12P34960 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.52■□□□□ 0.72
Mmp12P34960 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp12P34960 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.52■□□□□ 0.72
Mmp12P34960 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp12P34960 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp12P34960 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp12P34960 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp12P34960 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Mmp12P34960 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mmp12P34960 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp12P34960 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Mmp12P34960 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.51■□□□□ 0.71
Mmp12P34960 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp12P34960 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp12P34960 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp12P34960 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp12P34960 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Mmp12P34960 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp12P34960 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.5■□□□□ 0.71
Mmp12P34960 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Mmp12P34960 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Mmp12P34960 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp12P34960 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp12P34960 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Mmp12P34960 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Mmp12P34960 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp12P34960 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp12P34960 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp12P34960 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp12P34960 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp12P34960 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp12P34960 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Mmp12P34960 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Mmp12P34960 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Mmp12P34960 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp12P34960 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp12P34960 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp12P34960 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp12P34960 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp12P34960 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp12P34960 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.47■□□□□ 0.71
Mmp12P34960 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Mmp12P34960 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp12P34960 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp12P34960 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.47■□□□□ 0.71
Mmp12P34960 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.47■□□□□ 0.71
Mmp12P34960 Gm9870-201ENSMUST00000063874 645 ntBASIC19.47■□□□□ 0.71
Mmp12P34960 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp12P34960 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp12P34960 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp12P34960 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp12P34960 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.46■□□□□ 0.71
Mmp12P34960 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp12P34960 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp12P34960 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp12P34960 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.46■□□□□ 0.71
Mmp12P34960 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp12P34960 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp12P34960 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp12P34960 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp12P34960 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Mmp12P34960 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Mmp12P34960 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp12P34960 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp12P34960 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp12P34960 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp12P34960 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.44■□□□□ 0.7
Mmp12P34960 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Mmp12P34960 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.44■□□□□ 0.7
Mmp12P34960 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp12P34960 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp12P34960 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp12P34960 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.43■□□□□ 0.7
Mmp12P34960 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp12P34960 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp12P34960 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp12P34960 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp12P34960 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp12P34960 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp12P34960 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Mmp12P34960 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Mmp12P34960 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp12P34960 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp12P34960 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Mmp12P34960 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.42■□□□□ 0.7
Mmp12P34960 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp12P34960 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.42■□□□□ 0.7
Mmp12P34960 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp12P34960 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp12P34960 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp12P34960 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp12P34960 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp12P34960 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp12P34960 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms