Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
Mmp13P33435 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp13P33435 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp13P33435 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp13P33435 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.97■□□□□ 0.95
Mmp13P33435 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp13P33435 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Mmp13P33435 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Mmp13P33435 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp13P33435 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Mmp13P33435 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Mmp13P33435 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp13P33435 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Mmp13P33435 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Mmp13P33435 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Mmp13P33435 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp13P33435 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp13P33435 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp13P33435 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp13P33435 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Mmp13P33435 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp13P33435 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp13P33435 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp13P33435 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp13P33435 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp13P33435 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp13P33435 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp13P33435 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp13P33435 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Mmp13P33435 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp13P33435 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp13P33435 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp13P33435 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp13P33435 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp13P33435 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp13P33435 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp13P33435 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Mmp13P33435 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Mmp13P33435 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp13P33435 Gm10232-201ENSMUST00000089221 720 ntBASIC20.93■□□□□ 0.94
Mmp13P33435 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp13P33435 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp13P33435 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Mmp13P33435 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp13P33435 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp13P33435 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp13P33435 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Mmp13P33435 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp13P33435 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp13P33435 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp13P33435 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.92■□□□□ 0.94
Mmp13P33435 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp13P33435 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp13P33435 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp13P33435 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.91■□□□□ 0.94
Mmp13P33435 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp13P33435 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.91■□□□□ 0.94
Mmp13P33435 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.91■□□□□ 0.94
Mmp13P33435 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp13P33435 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp13P33435 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp13P33435 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp13P33435 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.9■□□□□ 0.94
Mmp13P33435 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.9■□□□□ 0.94
Mmp13P33435 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp13P33435 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mmp13P33435 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Mmp13P33435 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Mmp13P33435 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp13P33435 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp13P33435 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp13P33435 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp13P33435 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp13P33435 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Mmp13P33435 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp13P33435 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.88■□□□□ 0.93
Mmp13P33435 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.88■□□□□ 0.93
Mmp13P33435 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.88■□□□□ 0.93
Mmp13P33435 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp13P33435 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp13P33435 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp13P33435 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms