Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nckap1P28660 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1P28660 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1P28660 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nckap1P28660 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.44■□□□□ 0.86
Nckap1P28660 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1P28660 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1P28660 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1P28660 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.43■□□□□ 0.86
Nckap1P28660 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Nckap1P28660 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nckap1P28660 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1P28660 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1P28660 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1P28660 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nckap1P28660 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nckap1P28660 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1P28660 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1P28660 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.42■□□□□ 0.86
Nckap1P28660 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nckap1P28660 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nckap1P28660 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nckap1P28660 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1P28660 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1P28660 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1P28660 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1P28660 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.41■□□□□ 0.86
Nckap1P28660 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.41■□□□□ 0.86
Nckap1P28660 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Nckap1P28660 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Nckap1P28660 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Nckap1P28660 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nckap1P28660 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Nckap1P28660 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.4■□□□□ 0.86
Nckap1P28660 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nckap1P28660 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.4■□□□□ 0.86
Nckap1P28660 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nckap1P28660 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Nckap1P28660 Mir7075-201ENSMUST00000184187 82 ntBASIC20.4■□□□□ 0.86
Nckap1P28660 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nckap1P28660 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nckap1P28660 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nckap1P28660 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nckap1P28660 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.4■□□□□ 0.86
Nckap1P28660 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Nckap1P28660 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.39■□□□□ 0.86
Nckap1P28660 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nckap1P28660 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nckap1P28660 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nckap1P28660 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1P28660 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1P28660 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1P28660 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.39■□□□□ 0.85
Nckap1P28660 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1P28660 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1P28660 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1P28660 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.38■□□□□ 0.85
Nckap1P28660 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nckap1P28660 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nckap1P28660 Gm6139-201ENSMUST00000079261 882 ntBASIC20.38■□□□□ 0.85
Nckap1P28660 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nckap1P28660 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nckap1P28660 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nckap1P28660 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Nckap1P28660 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Nckap1P28660 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
Nckap1P28660 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Nckap1P28660 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Nckap1P28660 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nckap1P28660 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Nckap1P28660 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.37■□□□□ 0.85
Nckap1P28660 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nckap1P28660 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nckap1P28660 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nckap1P28660 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nckap1P28660 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.36■□□□□ 0.85
Nckap1P28660 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.36■□□□□ 0.85
Nckap1P28660 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nckap1P28660 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nckap1P28660 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nckap1P28660 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nckap1P28660 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nckap1P28660 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nckap1P28660 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nckap1P28660 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nckap1P28660 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nckap1P28660 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nckap1P28660 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nckap1P28660 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms