Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TP20293 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
TP20293 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TP20293 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TP20293 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TP20293 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TP20293 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TP20293 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TP20293 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TP20293 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.23■□□□□ 0.67
TP20293 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TP20293 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TP20293 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TP20293 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TP20293 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.22■□□□□ 0.67
TP20293 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.22■□□□□ 0.67
TP20293 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TP20293 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.22■□□□□ 0.67
TP20293 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TP20293 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.21■□□□□ 0.67
TP20293 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TP20293 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TP20293 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TP20293 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TP20293 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.21■□□□□ 0.67
TP20293 Gm40881-201ENSMUST00000223397 166 ntBASIC19.21■□□□□ 0.67
TP20293 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TP20293 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TP20293 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TP20293 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TP20293 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TP20293 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TP20293 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TP20293 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.2■□□□□ 0.66
TP20293 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.2■□□□□ 0.66
TP20293 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TP20293 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TP20293 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TP20293 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TP20293 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TP20293 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TP20293 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TP20293 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.19■□□□□ 0.66
TP20293 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TP20293 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TP20293 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TP20293 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TP20293 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TP20293 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TP20293 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TP20293 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TP20293 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TP20293 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TP20293 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TP20293 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TP20293 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TP20293 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TP20293 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TP20293 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.17■□□□□ 0.66
TP20293 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TP20293 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TP20293 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TP20293 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TP20293 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TP20293 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TP20293 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.16■□□□□ 0.66
TP20293 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TP20293 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.16■□□□□ 0.66
TP20293 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TP20293 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TP20293 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TP20293 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
TP20293 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TP20293 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TP20293 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TP20293 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TP20293 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.15■□□□□ 0.66
TP20293 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TP20293 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TP20293 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.15■□□□□ 0.66
TP20293 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.15■□□□□ 0.66
TP20293 Gm9959-201ENSMUST00000068277 390 ntBASIC19.15■□□□□ 0.66
TP20293 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TP20293 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TP20293 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TP20293 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TP20293 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.15■□□□□ 0.66
TP20293 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TP20293 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TP20293 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TP20293 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TP20293 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.14■□□□□ 0.65
TP20293 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TP20293 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TP20293 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TP20293 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
TP20293 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TP20293 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TP20293 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TP20293 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms