Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VimP20152 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VimP20152 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VimP20152 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.83■□□□□ 0.93
VimP20152 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VimP20152 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
VimP20152 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VimP20152 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VimP20152 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VimP20152 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
VimP20152 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
VimP20152 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VimP20152 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VimP20152 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
VimP20152 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VimP20152 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VimP20152 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VimP20152 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.82■□□□□ 0.92
VimP20152 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VimP20152 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VimP20152 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.82■□□□□ 0.92
VimP20152 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VimP20152 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VimP20152 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VimP20152 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VimP20152 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VimP20152 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VimP20152 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VimP20152 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VimP20152 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.81■□□□□ 0.92
VimP20152 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VimP20152 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
VimP20152 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.8■□□□□ 0.92
VimP20152 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.8■□□□□ 0.92
VimP20152 Mir3960-201ENSMUST00000198213 73 ntBASIC20.8■□□□□ 0.92
VimP20152 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VimP20152 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.8■□□□□ 0.92
VimP20152 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VimP20152 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VimP20152 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VimP20152 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.79■□□□□ 0.92
VimP20152 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VimP20152 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VimP20152 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VimP20152 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VimP20152 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.78■□□□□ 0.92
VimP20152 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VimP20152 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VimP20152 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VimP20152 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VimP20152 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VimP20152 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VimP20152 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VimP20152 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
VimP20152 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VimP20152 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VimP20152 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VimP20152 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.76■□□□□ 0.91
VimP20152 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.76■□□□□ 0.91
VimP20152 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.76■□□□□ 0.91
VimP20152 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VimP20152 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.76■□□□□ 0.91
VimP20152 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VimP20152 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VimP20152 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.75■□□□□ 0.91
VimP20152 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VimP20152 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VimP20152 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
VimP20152 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VimP20152 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VimP20152 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VimP20152 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VimP20152 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VimP20152 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VimP20152 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VimP20152 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VimP20152 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VimP20152 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VimP20152 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
VimP20152 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VimP20152 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VimP20152 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VimP20152 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
VimP20152 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VimP20152 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VimP20152 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
VimP20152 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VimP20152 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.73■□□□□ 0.91
VimP20152 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VimP20152 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms