Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmga1P17095 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hmga1P17095 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmga1P17095 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmga1P17095 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Hmga1P17095 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmga1P17095 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmga1P17095 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmga1P17095 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmga1P17095 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmga1P17095 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Hmga1P17095 Gm43530-201ENSMUST00000195920 274 ntBASIC21.21■□□□□ 0.99
Hmga1P17095 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hmga1P17095 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.2■□□□□ 0.98
Hmga1P17095 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.2■□□□□ 0.98
Hmga1P17095 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmga1P17095 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmga1P17095 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Hmga1P17095 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.19■□□□□ 0.98
Hmga1P17095 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmga1P17095 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmga1P17095 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Hmga1P17095 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmga1P17095 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmga1P17095 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmga1P17095 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga1P17095 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga1P17095 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga1P17095 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Hmga1P17095 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga1P17095 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga1P17095 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hmga1P17095 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.18■□□□□ 0.98
Hmga1P17095 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga1P17095 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.18■□□□□ 0.98
Hmga1P17095 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga1P17095 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga1P17095 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga1P17095 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmga1P17095 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hmga1P17095 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmga1P17095 Gm6139-201ENSMUST00000079261 882 ntBASIC21.17■□□□□ 0.98
Hmga1P17095 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.17■□□□□ 0.98
Hmga1P17095 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmga1P17095 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmga1P17095 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hmga1P17095 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hmga1P17095 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.16■□□□□ 0.98
Hmga1P17095 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmga1P17095 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmga1P17095 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmga1P17095 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.15■□□□□ 0.98
Hmga1P17095 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hmga1P17095 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hmga1P17095 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.15■□□□□ 0.98
Hmga1P17095 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmga1P17095 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.15■□□□□ 0.98
Hmga1P17095 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.15■□□□□ 0.98
Hmga1P17095 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.15■□□□□ 0.98
Hmga1P17095 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmga1P17095 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hmga1P17095 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmga1P17095 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.14■□□□□ 0.97
Hmga1P17095 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hmga1P17095 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmga1P17095 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmga1P17095 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmga1P17095 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmga1P17095 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmga1P17095 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmga1P17095 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmga1P17095 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Hmga1P17095 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmga1P17095 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.12■□□□□ 0.97
Hmga1P17095 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.12■□□□□ 0.97
Hmga1P17095 Mir7075-201ENSMUST00000184187 82 ntBASIC21.12■□□□□ 0.97
Hmga1P17095 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Hmga1P17095 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.12■□□□□ 0.97
Hmga1P17095 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmga1P17095 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmga1P17095 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmga1P17095 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
Hmga1P17095 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmga1P17095 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.11■□□□□ 0.97
Hmga1P17095 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmga1P17095 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hmga1P17095 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmga1P17095 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.1■□□□□ 0.97
Hmga1P17095 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Hmga1P17095 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Hmga1P17095 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmga1P17095 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hmga1P17095 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmga1P17095 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmga1P17095 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.09■□□□□ 0.97
Hmga1P17095 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.09■□□□□ 0.97
Hmga1P17095 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hmga1P17095 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmga1P17095 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hmga1P17095 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms