Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PtcraP0C6B2 Etf1-202ENSMUST00000180351 108 ntBASIC17.88■□□□□ 0.45
PtcraP0C6B2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PtcraP0C6B2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PtcraP0C6B2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PtcraP0C6B2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PtcraP0C6B2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PtcraP0C6B2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PtcraP0C6B2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PtcraP0C6B2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PtcraP0C6B2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PtcraP0C6B2 Gm9959-201ENSMUST00000068277 390 ntBASIC17.87■□□□□ 0.45
PtcraP0C6B2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PtcraP0C6B2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PtcraP0C6B2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PtcraP0C6B2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PtcraP0C6B2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.86■□□□□ 0.45
PtcraP0C6B2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PtcraP0C6B2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PtcraP0C6B2 Gm45102-201ENSMUST00000207427 857 ntBASIC17.86■□□□□ 0.45
PtcraP0C6B2 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.86■□□□□ 0.45
PtcraP0C6B2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
PtcraP0C6B2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PtcraP0C6B2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PtcraP0C6B2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PtcraP0C6B2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.85■□□□□ 0.45
PtcraP0C6B2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PtcraP0C6B2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.85■□□□□ 0.45
PtcraP0C6B2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PtcraP0C6B2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PtcraP0C6B2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PtcraP0C6B2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PtcraP0C6B2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PtcraP0C6B2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PtcraP0C6B2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PtcraP0C6B2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.84■□□□□ 0.45
PtcraP0C6B2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.84■□□□□ 0.45
PtcraP0C6B2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PtcraP0C6B2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PtcraP0C6B2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PtcraP0C6B2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PtcraP0C6B2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.84■□□□□ 0.45
PtcraP0C6B2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PtcraP0C6B2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PtcraP0C6B2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PtcraP0C6B2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
PtcraP0C6B2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PtcraP0C6B2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.83■□□□□ 0.44
PtcraP0C6B2 Rps24-207ENSMUST00000224568 714 ntBASIC17.83■□□□□ 0.44
PtcraP0C6B2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.83■□□□□ 0.44
PtcraP0C6B2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PtcraP0C6B2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PtcraP0C6B2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PtcraP0C6B2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PtcraP0C6B2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PtcraP0C6B2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PtcraP0C6B2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PtcraP0C6B2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PtcraP0C6B2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PtcraP0C6B2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PtcraP0C6B2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PtcraP0C6B2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PtcraP0C6B2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PtcraP0C6B2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PtcraP0C6B2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PtcraP0C6B2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PtcraP0C6B2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PtcraP0C6B2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PtcraP0C6B2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PtcraP0C6B2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PtcraP0C6B2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PtcraP0C6B2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PtcraP0C6B2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PtcraP0C6B2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PtcraP0C6B2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtcraP0C6B2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtcraP0C6B2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PtcraP0C6B2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtcraP0C6B2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.79■□□□□ 0.44
PtcraP0C6B2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
PtcraP0C6B2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtcraP0C6B2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.79■□□□□ 0.44
PtcraP0C6B2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtcraP0C6B2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.79■□□□□ 0.44
PtcraP0C6B2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtcraP0C6B2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PtcraP0C6B2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtcraP0C6B2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PtcraP0C6B2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.78■□□□□ 0.44
PtcraP0C6B2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtcraP0C6B2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtcraP0C6B2 Gm9870-201ENSMUST00000063874 645 ntBASIC17.78■□□□□ 0.44
PtcraP0C6B2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtcraP0C6B2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtcraP0C6B2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.78■□□□□ 0.44
PtcraP0C6B2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtcraP0C6B2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PtcraP0C6B2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PtcraP0C6B2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.77■□□□□ 0.44
PtcraP0C6B2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms