Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h2P0C090 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rc3h2P0C090 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Rc3h2P0C090 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Rc3h2P0C090 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.93■□□□□ 0.94
Rc3h2P0C090 Gm6139-201ENSMUST00000079261 882 ntBASIC20.93■□□□□ 0.94
Rc3h2P0C090 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rc3h2P0C090 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rc3h2P0C090 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.93■□□□□ 0.94
Rc3h2P0C090 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h2P0C090 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.92■□□□□ 0.94
Rc3h2P0C090 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.92■□□□□ 0.94
Rc3h2P0C090 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h2P0C090 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h2P0C090 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h2P0C090 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rc3h2P0C090 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h2P0C090 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.91■□□□□ 0.94
Rc3h2P0C090 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.91■□□□□ 0.94
Rc3h2P0C090 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rc3h2P0C090 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h2P0C090 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h2P0C090 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h2P0C090 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Rc3h2P0C090 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h2P0C090 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Mir7075-201ENSMUST00000184187 82 ntBASIC20.9■□□□□ 0.94
Rc3h2P0C090 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.9■□□□□ 0.94
Rc3h2P0C090 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.9■□□□□ 0.94
Rc3h2P0C090 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.89■□□□□ 0.94
Rc3h2P0C090 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rc3h2P0C090 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rc3h2P0C090 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rc3h2P0C090 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rc3h2P0C090 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rc3h2P0C090 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rc3h2P0C090 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h2P0C090 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h2P0C090 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h2P0C090 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.88■□□□□ 0.93
Rc3h2P0C090 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.88■□□□□ 0.93
Rc3h2P0C090 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h2P0C090 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h2P0C090 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Rc3h2P0C090 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h2P0C090 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h2P0C090 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h2P0C090 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h2P0C090 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Gm43530-201ENSMUST00000195920 274 ntBASIC20.86■□□□□ 0.93
Rc3h2P0C090 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.86■□□□□ 0.93
Rc3h2P0C090 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h2P0C090 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h2P0C090 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.85■□□□□ 0.93
Rc3h2P0C090 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rc3h2P0C090 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h2P0C090 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h2P0C090 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h2P0C090 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.85■□□□□ 0.93
Rc3h2P0C090 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h2P0C090 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h2P0C090 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.85■□□□□ 0.93
Rc3h2P0C090 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h2P0C090 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h2P0C090 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h2P0C090 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h2P0C090 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h2P0C090 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Rc3h2P0C090 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h2P0C090 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h2P0C090 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Rc3h2P0C090 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.84■□□□□ 0.93
Rc3h2P0C090 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h2P0C090 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms