Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.72■□□□□ 0.91
Hoxa9P09631 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.72■□□□□ 0.91
Hoxa9P09631 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.72■□□□□ 0.91
Hoxa9P09631 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa9P09631 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Hoxa9P09631 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa9P09631 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa9P09631 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Hoxa9P09631 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa9P09631 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.71■□□□□ 0.91
Hoxa9P09631 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Hoxa9P09631 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa9P09631 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa9P09631 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa9P09631 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Hoxa9P09631 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa9P09631 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa9P09631 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa9P09631 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa9P09631 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Hoxa9P09631 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Hoxa9P09631 Mir7075-201ENSMUST00000184187 82 ntBASIC20.7■□□□□ 0.9
Hoxa9P09631 Gm8495-201ENSMUST00000188740 694 ntBASIC20.7■□□□□ 0.9
Hoxa9P09631 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.7■□□□□ 0.9
Hoxa9P09631 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa9P09631 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa9P09631 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa9P09631 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa9P09631 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.7■□□□□ 0.9
Hoxa9P09631 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.69■□□□□ 0.9
Hoxa9P09631 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa9P09631 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa9P09631 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hoxa9P09631 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa9P09631 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Hoxa9P09631 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa9P09631 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxa9P09631 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.69■□□□□ 0.9
Hoxa9P09631 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa9P09631 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxa9P09631 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa9P09631 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxa9P09631 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa9P09631 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa9P09631 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa9P09631 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.68■□□□□ 0.9
Hoxa9P09631 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa9P09631 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa9P09631 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa9P09631 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa9P09631 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa9P09631 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa9P09631 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa9P09631 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
Hoxa9P09631 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa9P09631 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hoxa9P09631 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa9P09631 Gm18284-201ENSMUST00000172604 624 ntBASIC20.67■□□□□ 0.9
Hoxa9P09631 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.67■□□□□ 0.9
Hoxa9P09631 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa9P09631 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa9P09631 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa9P09631 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa9P09631 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa9P09631 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa9P09631 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa9P09631 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa9P09631 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa9P09631 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hoxa9P09631 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa9P09631 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hoxa9P09631 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.66■□□□□ 0.9
Hoxa9P09631 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.66■□□□□ 0.9
Hoxa9P09631 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Hoxa9P09631 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxa9P09631 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxa9P09631 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
Hoxa9P09631 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.65■□□□□ 0.9
Hoxa9P09631 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxa9P09631 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.65■□□□□ 0.9
Hoxa9P09631 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxa9P09631 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Hoxa9P09631 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxa9P09631 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxa9P09631 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxa9P09631 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.64■□□□□ 0.89
Hoxa9P09631 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.64■□□□□ 0.89
Hoxa9P09631 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa9P09631 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa9P09631 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.64■□□□□ 0.89
Hoxa9P09631 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Hoxa9P09631 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa9P09631 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa9P09631 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa9P09631 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa9P09631 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa9P09631 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa9P09631 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa9P09631 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Hoxa9P09631 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms