Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ercc1P07903 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc1P07903 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc1P07903 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc1P07903 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ercc1P07903 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc1P07903 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.12■□□□□ 0.33
Ercc1P07903 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ercc1P07903 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc1P07903 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Ercc1P07903 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc1P07903 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ercc1P07903 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.12■□□□□ 0.33
Ercc1P07903 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc1P07903 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ercc1P07903 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc1P07903 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc1P07903 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc1P07903 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ercc1P07903 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Ercc1P07903 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc1P07903 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc1P07903 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc1P07903 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc1P07903 Gm16437-201ENSMUST00000025669 507 ntBASIC17.11■□□□□ 0.33
Ercc1P07903 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc1P07903 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc1P07903 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ercc1P07903 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ercc1P07903 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc1P07903 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.11■□□□□ 0.33
Ercc1P07903 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ercc1P07903 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ercc1P07903 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc1P07903 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc1P07903 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ercc1P07903 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc1P07903 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc1P07903 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc1P07903 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc1P07903 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc1P07903 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc1P07903 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc1P07903 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc1P07903 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc1P07903 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc1P07903 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc1P07903 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc1P07903 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc1P07903 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc1P07903 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ercc1P07903 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ercc1P07903 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc1P07903 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc1P07903 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc1P07903 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc1P07903 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc1P07903 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.07■□□□□ 0.32
Ercc1P07903 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.07■□□□□ 0.32
Ercc1P07903 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ercc1P07903 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc1P07903 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc1P07903 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc1P07903 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ercc1P07903 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc1P07903 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.07■□□□□ 0.32
Ercc1P07903 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.06■□□□□ 0.32
Ercc1P07903 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ercc1P07903 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.06■□□□□ 0.32
Ercc1P07903 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ercc1P07903 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.05■□□□□ 0.32
Ercc1P07903 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ercc1P07903 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc1P07903 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc1P07903 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc1P07903 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ercc1P07903 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc1P07903 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ercc1P07903 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms