Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
P01852 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.75■□□□□ 0.59
P01852 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01852 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.74■□□□□ 0.59
P01852 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01852 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
P01852 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01852 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01852 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
P01852 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P01852 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01852 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01852 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01852 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.73■□□□□ 0.59
P01852 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01852 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01852 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01852 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01852 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01852 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
P01852 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01852 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.72■□□□□ 0.59
P01852 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P01852 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01852 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
P01852 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01852 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01852 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01852 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
P01852 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
P01852 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01852 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
P01852 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01852 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01852 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01852 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
P01852 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01852 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01852 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01852 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01852 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
P01852 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01852 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01852 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01852 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01852 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01852 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
P01852 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01852 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01852 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
P01852 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01852 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01852 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01852 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01852 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01852 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01852 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01852 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
P01852 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01852 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01852 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
P01852 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01852 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
P01852 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
P01852 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01852 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01852 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01852 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01852 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01852 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
P01852 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.67■□□□□ 0.58
P01852 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01852 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.67■□□□□ 0.58
P01852 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.67■□□□□ 0.58
P01852 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01852 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01852 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.66■□□□□ 0.58
P01852 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01852 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01852 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01852 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P01852 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01852 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
P01852 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01852 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01852 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P01852 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01852 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01852 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.65■□□□□ 0.58
P01852 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01852 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.65■□□□□ 0.58
P01852 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01852 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01852 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms