Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Syn1O88935 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Syn1O88935 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.32■■□□□ 1
Syn1O88935 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.32■■□□□ 1
Syn1O88935 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.32■■□□□ 1
Syn1O88935 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.32■■□□□ 1
Syn1O88935 Gm42778-201ENSMUST00000199644 553 ntBASIC21.32■■□□□ 1
Syn1O88935 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Syn1O88935 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Syn1O88935 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Syn1O88935 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Syn1O88935 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.31■■□□□ 1
Syn1O88935 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.31■■□□□ 1
Syn1O88935 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Syn1O88935 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.31■■□□□ 1
Syn1O88935 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Syn1O88935 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Syn1O88935 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Syn1O88935 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.3■■□□□ 1
Syn1O88935 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.3■■□□□ 1
Syn1O88935 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.3■■□□□ 1
Syn1O88935 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.3■■□□□ 1
Syn1O88935 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Syn1O88935 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Syn1O88935 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Syn1O88935 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.29■■□□□ 1
Syn1O88935 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Syn1O88935 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Syn1O88935 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.29■■□□□ 1
Syn1O88935 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.29■■□□□ 1
Syn1O88935 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.29■■□□□ 1
Syn1O88935 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Syn1O88935 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Syn1O88935 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Syn1O88935 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.28■■□□□ 1
Syn1O88935 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Syn1O88935 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Syn1O88935 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.28■■□□□ 1
Syn1O88935 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.28■■□□□ 1
Syn1O88935 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Syn1O88935 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.28■■□□□ 1
Syn1O88935 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Syn1O88935 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Syn1O88935 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Syn1O88935 Nespas-201ENSMUST00000143738 1083 ntBASIC21.27■■□□□ 1
Syn1O88935 Gm22325-201ENSMUST00000158904 308 ntBASIC21.27■■□□□ 1
Syn1O88935 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Syn1O88935 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Syn1O88935 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.27■■□□□ 1
Syn1O88935 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Syn1O88935 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Syn1O88935 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Syn1O88935 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.26■□□□□ 0.99
Syn1O88935 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.26■□□□□ 0.99
Syn1O88935 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Syn1O88935 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.26■□□□□ 0.99
Syn1O88935 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Syn1O88935 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Syn1O88935 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Syn1O88935 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Syn1O88935 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Syn1O88935 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Syn1O88935 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Syn1O88935 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.25■□□□□ 0.99
Syn1O88935 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.25■□□□□ 0.99
Syn1O88935 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Syn1O88935 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Syn1O88935 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Syn1O88935 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Syn1O88935 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.24■□□□□ 0.99
Syn1O88935 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Syn1O88935 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Syn1O88935 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Syn1O88935 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Syn1O88935 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Syn1O88935 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Syn1O88935 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Syn1O88935 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Syn1O88935 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Syn1O88935 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Syn1O88935 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Syn1O88935 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Syn1O88935 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.23■□□□□ 0.99
Syn1O88935 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Syn1O88935 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.23■□□□□ 0.99
Syn1O88935 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Syn1O88935 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Syn1O88935 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Syn1O88935 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Syn1O88935 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Syn1O88935 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.22■□□□□ 0.99
Syn1O88935 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Syn1O88935 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Syn1O88935 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Syn1O88935 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Syn1O88935 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Syn1O88935 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Syn1O88935 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Syn1O88935 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Syn1O88935 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms