Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Becn1O88597 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC23.31■■□□□ 1.32
Becn1O88597 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Becn1O88597 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Becn1O88597 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Becn1O88597 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Becn1O88597 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Becn1O88597 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Becn1O88597 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Becn1O88597 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Becn1O88597 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Becn1O88597 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
Becn1O88597 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Becn1O88597 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Becn1O88597 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Becn1O88597 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Becn1O88597 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Becn1O88597 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.29■■□□□ 1.32
Becn1O88597 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Becn1O88597 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Becn1O88597 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Becn1O88597 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Becn1O88597 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.28■■□□□ 1.32
Becn1O88597 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.28■■□□□ 1.32
Becn1O88597 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Becn1O88597 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Becn1O88597 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Becn1O88597 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Becn1O88597 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Becn1O88597 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.28■■□□□ 1.32
Becn1O88597 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Becn1O88597 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Becn1O88597 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Becn1O88597 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Becn1O88597 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.27■■□□□ 1.32
Becn1O88597 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Becn1O88597 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Becn1O88597 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Becn1O88597 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Becn1O88597 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.26■■□□□ 1.31
Becn1O88597 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.26■■□□□ 1.31
Becn1O88597 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Becn1O88597 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Becn1O88597 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Becn1O88597 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.26■■□□□ 1.31
Becn1O88597 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.26■■□□□ 1.31
Becn1O88597 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Becn1O88597 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.26■■□□□ 1.31
Becn1O88597 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Becn1O88597 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Becn1O88597 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Becn1O88597 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Becn1O88597 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.25■■□□□ 1.31
Becn1O88597 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.25■■□□□ 1.31
Becn1O88597 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Becn1O88597 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Becn1O88597 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Becn1O88597 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.24■■□□□ 1.31
Becn1O88597 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Becn1O88597 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Becn1O88597 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Becn1O88597 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Becn1O88597 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Becn1O88597 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Becn1O88597 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Becn1O88597 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.24■■□□□ 1.31
Becn1O88597 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Becn1O88597 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC23.24■■□□□ 1.31
Becn1O88597 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Becn1O88597 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Becn1O88597 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.23■■□□□ 1.31
Becn1O88597 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Becn1O88597 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Becn1O88597 Gm27502-201ENSMUST00000183495 199 ntBASIC23.23■■□□□ 1.31
Becn1O88597 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Becn1O88597 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Becn1O88597 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Becn1O88597 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Becn1O88597 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Becn1O88597 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Becn1O88597 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Becn1O88597 Cap2-205ENSMUST00000225824 1634 ntBASIC23.22■■□□□ 1.31
Becn1O88597 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Becn1O88597 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Becn1O88597 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Becn1O88597 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.21■■□□□ 1.31
Becn1O88597 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.21■■□□□ 1.31
Becn1O88597 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Becn1O88597 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Becn1O88597 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.2■■□□□ 1.3
Becn1O88597 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Becn1O88597 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
Becn1O88597 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Becn1O88597 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Becn1O88597 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Becn1O88597 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Becn1O88597 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Becn1O88597 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Becn1O88597 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Becn1O88597 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms