Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Capns1O88456 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Capns1O88456 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Capns1O88456 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capns1O88456 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Capns1O88456 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capns1O88456 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Capns1O88456 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capns1O88456 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Capns1O88456 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.86■□□□□ 0.61
Capns1O88456 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capns1O88456 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capns1O88456 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.86■□□□□ 0.61
Capns1O88456 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Capns1O88456 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.85■□□□□ 0.61
Capns1O88456 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Capns1O88456 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capns1O88456 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Capns1O88456 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Capns1O88456 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.85■□□□□ 0.61
Capns1O88456 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Capns1O88456 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capns1O88456 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Capns1O88456 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capns1O88456 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Capns1O88456 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Capns1O88456 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Capns1O88456 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Capns1O88456 Gm45102-201ENSMUST00000207427 857 ntBASIC18.84■□□□□ 0.61
Capns1O88456 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Capns1O88456 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Capns1O88456 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Capns1O88456 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Capns1O88456 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Capns1O88456 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Capns1O88456 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.83■□□□□ 0.6
Capns1O88456 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capns1O88456 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capns1O88456 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capns1O88456 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Capns1O88456 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capns1O88456 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capns1O88456 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capns1O88456 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Capns1O88456 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Capns1O88456 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Capns1O88456 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Capns1O88456 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Capns1O88456 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Capns1O88456 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Capns1O88456 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Capns1O88456 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Capns1O88456 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Capns1O88456 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Capns1O88456 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
Capns1O88456 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Capns1O88456 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Capns1O88456 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Capns1O88456 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Capns1O88456 Gm13238-201ENSMUST00000117655 780 ntBASIC18.81■□□□□ 0.6
Capns1O88456 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.81■□□□□ 0.6
Capns1O88456 Gm43566-201ENSMUST00000196851 808 ntBASIC18.81■□□□□ 0.6
Capns1O88456 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Capns1O88456 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Capns1O88456 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Capns1O88456 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Capns1O88456 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Capns1O88456 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Capns1O88456 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.8■□□□□ 0.6
Capns1O88456 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Capns1O88456 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.8■□□□□ 0.6
Capns1O88456 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Capns1O88456 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Capns1O88456 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Capns1O88456 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Capns1O88456 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Capns1O88456 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Capns1O88456 Gm15820-201ENSMUST00000201566 728 ntBASIC18.79■□□□□ 0.6
Capns1O88456 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Capns1O88456 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Capns1O88456 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Capns1O88456 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Capns1O88456 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Capns1O88456 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Capns1O88456 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Capns1O88456 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.78■□□□□ 0.6
Capns1O88456 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Capns1O88456 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Capns1O88456 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Capns1O88456 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Capns1O88456 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.78■□□□□ 0.6
Capns1O88456 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Capns1O88456 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Capns1O88456 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Capns1O88456 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Capns1O88456 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Capns1O88456 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Capns1O88456 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Capns1O88456 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Capns1O88456 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms