Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.66■□□□□ 0.74
Tgfbr3O88393 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tgfbr3O88393 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tgfbr3O88393 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tgfbr3O88393 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.66■□□□□ 0.74
Tgfbr3O88393 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Tgfbr3O88393 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tgfbr3O88393 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tgfbr3O88393 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Tgfbr3O88393 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.65■□□□□ 0.74
Tgfbr3O88393 Gm43530-201ENSMUST00000195920 274 ntBASIC19.65■□□□□ 0.74
Tgfbr3O88393 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tgfbr3O88393 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tgfbr3O88393 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tgfbr3O88393 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tgfbr3O88393 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tgfbr3O88393 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tgfbr3O88393 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.64■□□□□ 0.73
Tgfbr3O88393 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.64■□□□□ 0.73
Tgfbr3O88393 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tgfbr3O88393 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tgfbr3O88393 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tgfbr3O88393 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tgfbr3O88393 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tgfbr3O88393 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tgfbr3O88393 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tgfbr3O88393 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tgfbr3O88393 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tgfbr3O88393 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tgfbr3O88393 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tgfbr3O88393 Spcs1-204ENSMUST00000226782 949 ntBASIC19.63■□□□□ 0.73
Tgfbr3O88393 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.63■□□□□ 0.73
Tgfbr3O88393 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tgfbr3O88393 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.63■□□□□ 0.73
Tgfbr3O88393 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tgfbr3O88393 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr3O88393 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tgfbr3O88393 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tgfbr3O88393 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Tgfbr3O88393 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tgfbr3O88393 Gm26833-201ENSMUST00000180899 440 ntBASIC19.61■□□□□ 0.73
Tgfbr3O88393 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tgfbr3O88393 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.61■□□□□ 0.73
Tgfbr3O88393 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tgfbr3O88393 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tgfbr3O88393 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tgfbr3O88393 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Tgfbr3O88393 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Tgfbr3O88393 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tgfbr3O88393 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Tgfbr3O88393 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tgfbr3O88393 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tgfbr3O88393 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tgfbr3O88393 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tgfbr3O88393 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tgfbr3O88393 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tgfbr3O88393 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tgfbr3O88393 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tgfbr3O88393 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tgfbr3O88393 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tgfbr3O88393 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tgfbr3O88393 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tgfbr3O88393 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tgfbr3O88393 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Tgfbr3O88393 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tgfbr3O88393 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.57■□□□□ 0.72
Tgfbr3O88393 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tgfbr3O88393 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.57■□□□□ 0.72
Tgfbr3O88393 Gm43060-201ENSMUST00000200621 289 ntBASIC19.57■□□□□ 0.72
Tgfbr3O88393 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tgfbr3O88393 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tgfbr3O88393 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tgfbr3O88393 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.56■□□□□ 0.72
Tgfbr3O88393 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tgfbr3O88393 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tgfbr3O88393 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tgfbr3O88393 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tgfbr3O88393 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tgfbr3O88393 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms