Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc4O35988 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc4O35988 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc4O35988 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc4O35988 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdc4O35988 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sdc4O35988 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc4O35988 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc4O35988 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc4O35988 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.2■□□□□ 0.98
Sdc4O35988 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc4O35988 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc4O35988 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc4O35988 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc4O35988 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sdc4O35988 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Sdc4O35988 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc4O35988 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc4O35988 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc4O35988 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc4O35988 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc4O35988 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdc4O35988 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc4O35988 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc4O35988 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc4O35988 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.18■□□□□ 0.98
Sdc4O35988 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc4O35988 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc4O35988 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Sdc4O35988 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc4O35988 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
Sdc4O35988 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc4O35988 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdc4O35988 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdc4O35988 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.17■□□□□ 0.98
Sdc4O35988 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdc4O35988 Gm45417-201ENSMUST00000209533 758 ntBASIC21.17■□□□□ 0.98
Sdc4O35988 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sdc4O35988 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sdc4O35988 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sdc4O35988 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.16■□□□□ 0.98
Sdc4O35988 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sdc4O35988 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sdc4O35988 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sdc4O35988 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sdc4O35988 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sdc4O35988 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.16■□□□□ 0.98
Sdc4O35988 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.15■□□□□ 0.98
Sdc4O35988 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc4O35988 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc4O35988 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.15■□□□□ 0.98
Sdc4O35988 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc4O35988 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc4O35988 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc4O35988 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc4O35988 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Sdc4O35988 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Sdc4O35988 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sdc4O35988 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sdc4O35988 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sdc4O35988 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
Sdc4O35988 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sdc4O35988 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Sdc4O35988 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sdc4O35988 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.14■□□□□ 0.97
Sdc4O35988 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc4O35988 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.13■□□□□ 0.97
Sdc4O35988 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc4O35988 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Sdc4O35988 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc4O35988 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc4O35988 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.13■□□□□ 0.97
Sdc4O35988 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.13■□□□□ 0.97
Sdc4O35988 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Sdc4O35988 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc4O35988 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc4O35988 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.13■□□□□ 0.97
Sdc4O35988 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc4O35988 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdc4O35988 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdc4O35988 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sdc4O35988 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.12■□□□□ 0.97
Sdc4O35988 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdc4O35988 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.12■□□□□ 0.97
Sdc4O35988 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdc4O35988 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.12■□□□□ 0.97
Sdc4O35988 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.11■□□□□ 0.97
Sdc4O35988 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sdc4O35988 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.11■□□□□ 0.97
Sdc4O35988 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sdc4O35988 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sdc4O35988 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.11■□□□□ 0.97
Sdc4O35988 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.11■□□□□ 0.97
Sdc4O35988 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sdc4O35988 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Sdc4O35988 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sdc4O35988 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sdc4O35988 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sdc4O35988 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sdc4O35988 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms