Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1O35604 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1O35604 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1O35604 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1O35604 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npc1O35604 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Npc1O35604 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.02■□□□□ 0.8
Npc1O35604 Gm13241-201ENSMUST00000094493 780 ntBASIC20.02■□□□□ 0.8
Npc1O35604 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
Npc1O35604 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1O35604 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.01■□□□□ 0.79
Npc1O35604 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1O35604 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.01■□□□□ 0.79
Npc1O35604 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1O35604 Gm9847-201ENSMUST00000052528 599 ntBASIC20.01■□□□□ 0.79
Npc1O35604 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1O35604 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1O35604 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1O35604 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20■□□□□ 0.79
Npc1O35604 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Npc1O35604 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Npc1O35604 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Npc1O35604 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20■□□□□ 0.79
Npc1O35604 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Npc1O35604 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20■□□□□ 0.79
Npc1O35604 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1O35604 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1O35604 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1O35604 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.99■□□□□ 0.79
Npc1O35604 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1O35604 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.99■□□□□ 0.79
Npc1O35604 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1O35604 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1O35604 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1O35604 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1O35604 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.98■□□□□ 0.79
Npc1O35604 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
Npc1O35604 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1O35604 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1O35604 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1O35604 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1O35604 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Npc1O35604 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1O35604 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1O35604 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.97■□□□□ 0.79
Npc1O35604 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1O35604 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1O35604 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1O35604 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1O35604 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1O35604 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1O35604 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1O35604 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1O35604 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1O35604 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Npc1O35604 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Npc1O35604 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1O35604 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1O35604 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1O35604 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.95■□□□□ 0.78
Npc1O35604 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.95■□□□□ 0.78
Npc1O35604 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1O35604 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1O35604 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Npc1O35604 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1O35604 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1O35604 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1O35604 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1O35604 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.94■□□□□ 0.78
Npc1O35604 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.94■□□□□ 0.78
Npc1O35604 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1O35604 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1O35604 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1O35604 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1O35604 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1O35604 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1O35604 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1O35604 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Npc1O35604 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1O35604 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.93■□□□□ 0.78
Npc1O35604 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1O35604 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Npc1O35604 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1O35604 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1O35604 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1O35604 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Npc1O35604 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1O35604 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1O35604 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1O35604 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1O35604 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1O35604 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1O35604 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.91■□□□□ 0.78
Npc1O35604 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1O35604 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1O35604 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1O35604 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Npc1O35604 Gm9870-201ENSMUST00000063874 645 ntBASIC19.91■□□□□ 0.78
Npc1O35604 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1O35604 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms