Protein–RNA interactions for Protein: O35324

Sh2d1b, SH2 domain-containing protein 1B, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1bO35324 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
Sh2d1bO35324 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.28■□□□□ 0.68
Sh2d1bO35324 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.28■□□□□ 0.68
Sh2d1bO35324 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
Sh2d1bO35324 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Sh2d1bO35324 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d1bO35324 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d1bO35324 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d1bO35324 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sh2d1bO35324 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sh2d1bO35324 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d1bO35324 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh2d1bO35324 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d1bO35324 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d1bO35324 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d1bO35324 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Sh2d1bO35324 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d1bO35324 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d1bO35324 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.26■□□□□ 0.67
Sh2d1bO35324 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d1bO35324 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d1bO35324 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d1bO35324 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d1bO35324 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.25■□□□□ 0.67
Sh2d1bO35324 Gm8493-201ENSMUST00000196881 489 ntBASIC19.25■□□□□ 0.67
Sh2d1bO35324 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d1bO35324 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.25■□□□□ 0.67
Sh2d1bO35324 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d1bO35324 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d1bO35324 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sh2d1bO35324 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d1bO35324 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Sh2d1bO35324 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d1bO35324 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sh2d1bO35324 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.23■□□□□ 0.67
Sh2d1bO35324 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sh2d1bO35324 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2d1bO35324 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sh2d1bO35324 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d1bO35324 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d1bO35324 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d1bO35324 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Sh2d1bO35324 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d1bO35324 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.22■□□□□ 0.67
Sh2d1bO35324 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d1bO35324 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sh2d1bO35324 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sh2d1bO35324 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.21■□□□□ 0.67
Sh2d1bO35324 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d1bO35324 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d1bO35324 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.2■□□□□ 0.66
Sh2d1bO35324 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2d1bO35324 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.2■□□□□ 0.66
Sh2d1bO35324 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d1bO35324 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d1bO35324 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sh2d1bO35324 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh2d1bO35324 Spcs1-204ENSMUST00000226782 949 ntBASIC19.19■□□□□ 0.66
Sh2d1bO35324 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh2d1bO35324 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Sh2d1bO35324 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2d1bO35324 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2d1bO35324 Gm43173-201ENSMUST00000202246 593 ntBASIC19.18■□□□□ 0.66
Sh2d1bO35324 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.18■□□□□ 0.66
Sh2d1bO35324 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d1bO35324 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d1bO35324 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d1bO35324 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms