Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ercc2O08811 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc2O08811 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc2O08811 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Ercc2O08811 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc2O08811 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
Ercc2O08811 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc2O08811 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ercc2O08811 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.05■□□□□ 0.96
Ercc2O08811 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ercc2O08811 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc2O08811 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc2O08811 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.05■□□□□ 0.96
Ercc2O08811 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc2O08811 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc2O08811 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc2O08811 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc2O08811 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc2O08811 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc2O08811 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ercc2O08811 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc2O08811 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc2O08811 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc2O08811 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc2O08811 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc2O08811 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc2O08811 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc2O08811 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc2O08811 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.03■□□□□ 0.96
Ercc2O08811 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ercc2O08811 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc2O08811 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc2O08811 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc2O08811 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc2O08811 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc2O08811 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Ercc2O08811 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc2O08811 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc2O08811 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc2O08811 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc2O08811 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc2O08811 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc2O08811 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ercc2O08811 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ercc2O08811 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ercc2O08811 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Ercc2O08811 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.01■□□□□ 0.95
Ercc2O08811 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc2O08811 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc2O08811 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc2O08811 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.01■□□□□ 0.95
Ercc2O08811 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc2O08811 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc2O08811 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc2O08811 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ercc2O08811 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21■□□□□ 0.95
Ercc2O08811 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ercc2O08811 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21■□□□□ 0.95
Ercc2O08811 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ercc2O08811 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc2O08811 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc2O08811 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.99■□□□□ 0.95
Ercc2O08811 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc2O08811 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc2O08811 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Ercc2O08811 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.99■□□□□ 0.95
Ercc2O08811 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc2O08811 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ercc2O08811 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc2O08811 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc2O08811 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ercc2O08811 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc2O08811 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc2O08811 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc2O08811 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc2O08811 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ercc2O08811 Gm22238-201ENSMUST00000175222 88 ntBASIC20.98■□□□□ 0.95
Ercc2O08811 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc2O08811 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.98■□□□□ 0.95
Ercc2O08811 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc2O08811 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ercc2O08811 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc2O08811 Gm7143-201ENSMUST00000222811 859 ntBASIC20.97■□□□□ 0.95
Ercc2O08811 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc2O08811 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc2O08811 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc2O08811 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc2O08811 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc2O08811 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc2O08811 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ercc2O08811 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Ercc2O08811 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ercc2O08811 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ercc2O08811 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ercc2O08811 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ercc2O08811 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.95■□□□□ 0.94
Ercc2O08811 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.95■□□□□ 0.94
Ercc2O08811 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ercc2O08811 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ercc2O08811 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms