Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Ccdc149F6V035 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc149F6V035 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc149F6V035 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.89■□□□□ 0.93
Ccdc149F6V035 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccdc149F6V035 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.88■□□□□ 0.93
Ccdc149F6V035 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc149F6V035 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc149F6V035 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc149F6V035 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc149F6V035 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.88■□□□□ 0.93
Ccdc149F6V035 Gm43530-201ENSMUST00000195920 274 ntBASIC20.88■□□□□ 0.93
Ccdc149F6V035 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc149F6V035 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc149F6V035 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc149F6V035 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.88■□□□□ 0.93
Ccdc149F6V035 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc149F6V035 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc149F6V035 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccdc149F6V035 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc149F6V035 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc149F6V035 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc149F6V035 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc149F6V035 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc149F6V035 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccdc149F6V035 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc149F6V035 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc149F6V035 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc149F6V035 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc149F6V035 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc149F6V035 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc149F6V035 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc149F6V035 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.85■□□□□ 0.93
Ccdc149F6V035 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc149F6V035 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc149F6V035 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.85■□□□□ 0.93
Ccdc149F6V035 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc149F6V035 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc149F6V035 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc149F6V035 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc149F6V035 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc149F6V035 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc149F6V035 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc149F6V035 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.84■□□□□ 0.93
Ccdc149F6V035 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc149F6V035 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc149F6V035 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc149F6V035 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc149F6V035 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc149F6V035 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc149F6V035 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc149F6V035 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc149F6V035 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc149F6V035 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc149F6V035 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Ccdc149F6V035 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc149F6V035 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc149F6V035 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc149F6V035 Gm8493-201ENSMUST00000196881 489 ntBASIC20.82■□□□□ 0.92
Ccdc149F6V035 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ccdc149F6V035 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc149F6V035 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc149F6V035 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Ccdc149F6V035 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc149F6V035 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc149F6V035 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.79■□□□□ 0.92
Ccdc149F6V035 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.79■□□□□ 0.92
Ccdc149F6V035 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc149F6V035 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc149F6V035 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms