Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Gm12251-201ENSMUST00000117893 792 ntBASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.66■□□□□ 0.9
Gm3854A0A1B0GSS6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3854A0A1B0GSS6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3854A0A1B0GSS6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.66■□□□□ 0.9
Gm3854A0A1B0GSS6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.66■□□□□ 0.9
Gm3854A0A1B0GSS6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3854A0A1B0GSS6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3854A0A1B0GSS6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3854A0A1B0GSS6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3854A0A1B0GSS6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Gm3854A0A1B0GSS6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3854A0A1B0GSS6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3854A0A1B0GSS6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3854A0A1B0GSS6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3854A0A1B0GSS6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gm3854A0A1B0GSS6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3854A0A1B0GSS6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3854A0A1B0GSS6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3854A0A1B0GSS6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3854A0A1B0GSS6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3854A0A1B0GSS6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3854A0A1B0GSS6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3854A0A1B0GSS6 Gm43530-201ENSMUST00000195920 274 ntBASIC20.64■□□□□ 0.89
Gm3854A0A1B0GSS6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3854A0A1B0GSS6 Gm5874-201ENSMUST00000096101 508 ntBASIC20.64■□□□□ 0.89
Gm3854A0A1B0GSS6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3854A0A1B0GSS6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3854A0A1B0GSS6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3854A0A1B0GSS6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.62■□□□□ 0.89
Gm3854A0A1B0GSS6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
Gm3854A0A1B0GSS6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3854A0A1B0GSS6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.62■□□□□ 0.89
Gm3854A0A1B0GSS6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
Gm3854A0A1B0GSS6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3854A0A1B0GSS6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3854A0A1B0GSS6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Gm3854A0A1B0GSS6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3854A0A1B0GSS6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.61■□□□□ 0.89
Gm3854A0A1B0GSS6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Gm3854A0A1B0GSS6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3854A0A1B0GSS6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3854A0A1B0GSS6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3854A0A1B0GSS6 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.6■□□□□ 0.89
Gm3854A0A1B0GSS6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3854A0A1B0GSS6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3854A0A1B0GSS6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3854A0A1B0GSS6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3854A0A1B0GSS6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3854A0A1B0GSS6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3854A0A1B0GSS6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3854A0A1B0GSS6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.59■□□□□ 0.89
Gm3854A0A1B0GSS6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3854A0A1B0GSS6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3854A0A1B0GSS6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3854A0A1B0GSS6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3854A0A1B0GSS6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3854A0A1B0GSS6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3854A0A1B0GSS6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
Gm3854A0A1B0GSS6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3854A0A1B0GSS6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.58■□□□□ 0.89
Gm3854A0A1B0GSS6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
Gm3854A0A1B0GSS6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm3854A0A1B0GSS6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm3854A0A1B0GSS6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Gm3854A0A1B0GSS6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Gm26833-201ENSMUST00000180899 440 ntBASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm3854A0A1B0GSS6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3854A0A1B0GSS6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3854A0A1B0GSS6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3854A0A1B0GSS6 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms