Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv13-2A0A140T8N6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-2A0A140T8N6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-2A0A140T8N6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-2A0A140T8N6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-2A0A140T8N6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.29□□□□□ -0.12
Trbv13-2A0A140T8N6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-2A0A140T8N6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-2A0A140T8N6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.27□□□□□ -0.12
Trbv13-2A0A140T8N6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-2A0A140T8N6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-2A0A140T8N6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-2A0A140T8N6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trbv13-2A0A140T8N6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-2A0A140T8N6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv13-2A0A140T8N6 Gm40881-201ENSMUST00000223397 166 ntBASIC14.27□□□□□ -0.13
Trbv13-2A0A140T8N6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-2A0A140T8N6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-2A0A140T8N6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-2A0A140T8N6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-2A0A140T8N6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-2A0A140T8N6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv13-2A0A140T8N6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv13-2A0A140T8N6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv13-2A0A140T8N6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-2A0A140T8N6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.22□□□□□ -0.13
Trbv13-2A0A140T8N6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-2A0A140T8N6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv13-2A0A140T8N6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-2A0A140T8N6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-2A0A140T8N6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv13-2A0A140T8N6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms