Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Igkv1-88A0A140T8N1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Igkv1-88A0A140T8N1 Hsf1-207ENSMUST00000228371 2102 ntBASIC13.52□□□□□ -0.24
Igkv1-88A0A140T8N1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Igkv1-88A0A140T8N1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Igkv1-88A0A140T8N1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC13.52□□□□□ -0.24
Igkv1-88A0A140T8N1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Igkv1-88A0A140T8N1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Igkv1-88A0A140T8N1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Igkv1-88A0A140T8N1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Igkv1-88A0A140T8N1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Igkv1-88A0A140T8N1 Gm43403-201ENSMUST00000198011 1786 ntBASIC13.52□□□□□ -0.25
Igkv1-88A0A140T8N1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Igkv1-88A0A140T8N1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Igkv1-88A0A140T8N1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Igkv1-88A0A140T8N1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv1-88A0A140T8N1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv1-88A0A140T8N1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Igkv1-88A0A140T8N1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Igkv1-88A0A140T8N1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Igkv1-88A0A140T8N1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Igkv1-88A0A140T8N1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Igkv1-88A0A140T8N1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Igkv1-88A0A140T8N1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.46□□□□□ -0.25
Igkv1-88A0A140T8N1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Igkv1-88A0A140T8N1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Igkv1-88A0A140T8N1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Igkv1-88A0A140T8N1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Igkv1-88A0A140T8N1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Igkv1-88A0A140T8N1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Igkv1-88A0A140T8N1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Igkv1-88A0A140T8N1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
Igkv1-88A0A140T8N1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms