Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.11■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.08■□□□□ 0.33
Rpl23a-ps3A0A140T8M7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.08■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.08■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm5812-201ENSMUST00000061073 957 ntBASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl23a-ps3A0A140T8M7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms