Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Igkv8-28A0A0G2JE47 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-28A0A0G2JE47 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-28A0A0G2JE47 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-28A0A0G2JE47 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-28A0A0G2JE47 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-28A0A0G2JE47 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC12.84□□□□□ -0.35
Igkv8-28A0A0G2JE47 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-28A0A0G2JE47 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-28A0A0G2JE47 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv8-28A0A0G2JE47 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Igkv8-28A0A0G2JE47 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Igkv8-28A0A0G2JE47 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Igkv8-28A0A0G2JE47 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Igkv8-28A0A0G2JE47 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-28A0A0G2JE47 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-28A0A0G2JE47 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gm43545-201ENSMUST00000196765 2779 ntBASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-28A0A0G2JE47 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gm7432-201ENSMUST00000210343 879 ntBASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 AC153911.1-201ENSMUST00000220378 758 ntBASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Gm13889-201ENSMUST00000099689 1386 ntBASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-28A0A0G2JE47 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 AC164883.3-201ENSMUST00000227396 1774 ntBASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-28A0A0G2JE47 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms