Protein–RNA interactions for Protein: A0A087WQ54

Gm28285, Predicted gene 28285 (Fragment), mousemouse

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28285A0A087WQ54 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28285A0A087WQ54 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.81■□□□□ 0.28
Gm28285A0A087WQ54 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28285A0A087WQ54 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm28285A0A087WQ54 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28285A0A087WQ54 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28285A0A087WQ54 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28285A0A087WQ54 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.8■□□□□ 0.28
Gm28285A0A087WQ54 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28285A0A087WQ54 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28285A0A087WQ54 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.77■□□□□ 0.28
Gm28285A0A087WQ54 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28285A0A087WQ54 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.77■□□□□ 0.28
Gm28285A0A087WQ54 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.77■□□□□ 0.28
Gm28285A0A087WQ54 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28285A0A087WQ54 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.77■□□□□ 0.28
Gm28285A0A087WQ54 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm28285A0A087WQ54 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm28285A0A087WQ54 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28285A0A087WQ54 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28285A0A087WQ54 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28285A0A087WQ54 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28285A0A087WQ54 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28285A0A087WQ54 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28285A0A087WQ54 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28285A0A087WQ54 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Gm28285A0A087WQ54 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28285A0A087WQ54 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Gm28285A0A087WQ54 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28285A0A087WQ54 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28285A0A087WQ54 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms