Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-3A0A075B695 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-3A0A075B695 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-3A0A075B695 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Gm43566-201ENSMUST00000196851 808 ntBASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-3A0A075B695 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-3A0A075B695 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-3A0A075B695 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.59□□□□□ -0.07
Trav9d-3A0A075B695 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-3A0A075B695 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav9d-3A0A075B695 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-3A0A075B695 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-3A0A075B695 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9d-3A0A075B695 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9d-3A0A075B695 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav9d-3A0A075B695 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-3A0A075B695 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav9d-3A0A075B695 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-3A0A075B695 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.58□□□□□ -0.08
Trav9d-3A0A075B695 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav9d-3A0A075B695 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-3A0A075B695 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-3A0A075B695 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-3A0A075B695 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-3A0A075B695 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav9d-3A0A075B695 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-3A0A075B695 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-3A0A075B695 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-3A0A075B695 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-3A0A075B695 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-3A0A075B695 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-3A0A075B695 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-3A0A075B695 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-3A0A075B695 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-3A0A075B695 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trav9d-3A0A075B695 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-3A0A075B695 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9d-3A0A075B695 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9d-3A0A075B695 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.52□□□□□ -0.08
Trav9d-3A0A075B695 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9d-3A0A075B695 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms