Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-4A0A075B654 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-4A0A075B654 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav3-4A0A075B654 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav3-4A0A075B654 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav3-4A0A075B654 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-4A0A075B654 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav3-4A0A075B654 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav3-4A0A075B654 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-4A0A075B654 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-4A0A075B654 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-4A0A075B654 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-4A0A075B654 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-4A0A075B654 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-4A0A075B654 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms