Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.41■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav15d-1-dv6d-1A0A075B624 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Gm14523-201ENSMUST00000117260 558 ntBASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Gm27502-201ENSMUST00000183495 199 ntBASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.36■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.35■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav15d-1-dv6d-1A0A075B624 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms