Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Gm43184-201ENSMUST00000197247 542 ntBASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb2S4R1M3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb2S4R1M3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb2S4R1M3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Gm26083-201ENSMUST00000157904 193 ntBASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Gm28071-201ENSMUST00000190355 478 ntBASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Gm9797-202ENSMUST00000218003 294 ntBASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb2S4R1M3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms