Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk3aQ9JKX8 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Upk3aQ9JKX8 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Upk3aQ9JKX8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Gm10807-201ENSMUST00000177134 795 ntBASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upk3aQ9JKX8 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Gm13916-201ENSMUST00000117368 628 ntBASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Gm11500-201ENSMUST00000118237 601 ntBASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Gm15595-201ENSMUST00000120840 961 ntBASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Ntng1-201ENSMUST00000051253 327 ntBASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upk3aQ9JKX8 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gm23251-201ENSMUST00000103773 110 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms