Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtn4Q99P72 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm7416-201ENSMUST00000117448 1487 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm13732-201ENSMUST00000117753 535 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm12997-201ENSMUST00000120207 640 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm16570-201ENSMUST00000161951 436 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Gm40598-201ENSMUST00000222953 547 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.8■□□□□ 0.12
Rtn4Q99P72 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4Q99P72 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm20689-201ENSMUST00000176033 279 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm28335-201ENSMUST00000186204 696 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm29663-201ENSMUST00000186962 853 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm28558-201ENSMUST00000187373 696 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm28734-201ENSMUST00000188104 696 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm28968-201ENSMUST00000190413 696 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm38229-201ENSMUST00000191931 696 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm38121-201ENSMUST00000193213 696 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm37991-201ENSMUST00000194297 696 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm38035-201ENSMUST00000194427 696 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm38350-201ENSMUST00000194789 696 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.79■□□□□ 0.12
Rtn4Q99P72 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.79■□□□□ 0.12
Rtn4Q99P72 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4Q99P72 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm37370-201ENSMUST00000191996 1410 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Atxn7l1os1-201ENSMUST00000155877 1836 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms