Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smarcd2Q99JR8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smarcd2Q99JR8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smarcd2Q99JR8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smarcd2Q99JR8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
Smarcd2Q99JR8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smarcd2Q99JR8 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Smarcd2Q99JR8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
Smarcd2Q99JR8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm13117-201ENSMUST00000120894 691 ntBASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm10169-201ENSMUST00000121822 348 ntBASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm9135-201ENSMUST00000182963 990 ntBASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm5805-201ENSMUST00000072779 456 ntBASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd2Q99JR8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Smarcd2Q99JR8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms