Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Cuedc1Q8R3V6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gm12165-201ENSMUST00000117047 342 ntBASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gm15711-201ENSMUST00000118889 535 ntBASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gm12029-201ENSMUST00000120073 832 ntBASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gm15398-202ENSMUST00000219998 1477 ntTSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.93□□□□□ -0.66
Cuedc1Q8R3V6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Gm13035-201ENSMUST00000117496 342 ntBASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Gm16397-201ENSMUST00000122201 494 ntBASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Gm5616-201ENSMUST00000165252 384 ntBASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Gm8741-201ENSMUST00000174736 384 ntBASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Gm9540-201ENSMUST00000188230 478 ntBASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cuedc1Q8R3V6 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms