Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.06■□□□□ 0
Chmp7Q8R1T1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp7Q8R1T1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp7Q8R1T1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Gm12247-201ENSMUST00000117585 670 ntBASIC15.05■□□□□ -0
Chmp7Q8R1T1 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.05■□□□□ -0
Chmp7Q8R1T1 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.05■□□□□ -0
Chmp7Q8R1T1 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Gm45120-201ENSMUST00000208880 408 ntBASIC15.05■□□□□ -0
Chmp7Q8R1T1 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Gm9139-201ENSMUST00000218817 700 ntBASIC15.05■□□□□ -0
Chmp7Q8R1T1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC15.05■□□□□ -0
Chmp7Q8R1T1 AC134869.4-202ENSMUST00000224350 837 ntBASIC15.05■□□□□ -0
Chmp7Q8R1T1 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.05■□□□□ -0
Chmp7Q8R1T1 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.05■□□□□ -0
Chmp7Q8R1T1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chmp7Q8R1T1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Gm14219-201ENSMUST00000120414 288 ntBASIC15.04■□□□□ -0
Chmp7Q8R1T1 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Mir6407-201ENSMUST00000184510 101 ntBASIC15.04■□□□□ -0
Chmp7Q8R1T1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Gm29410-201ENSMUST00000188383 694 ntBASIC15.04■□□□□ -0
Chmp7Q8R1T1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC15.04■□□□□ -0
Chmp7Q8R1T1 Gm5298-201ENSMUST00000201122 892 ntBASIC15.04■□□□□ -0
Chmp7Q8R1T1 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.04■□□□□ -0
Chmp7Q8R1T1 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 AC154184.3-201ENSMUST00000225620 1090 ntBASIC15.04■□□□□ -0
Chmp7Q8R1T1 AC164437.3-201ENSMUST00000228323 347 ntBASIC15.04■□□□□ -0
Chmp7Q8R1T1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp7Q8R1T1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms