Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm14130-201ENSMUST00000118417 987 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm5419-201ENSMUST00000119301 527 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm15610-201ENSMUST00000120584 195 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm35960-201ENSMUST00000202712 767 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm43962-201ENSMUST00000203898 190 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm17812-201ENSMUST00000204935 318 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ParpbpQ6IRT3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Mir433-201ENSMUST00000093564 124 ntBASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
ParpbpQ6IRT3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Gm27627-201ENSMUST00000183644 150 ntBASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms