Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.86□□□□□ -0.51
SmoP56726 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.86□□□□□ -0.51
SmoP56726 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SmoP56726 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SmoP56726 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SmoP56726 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.85□□□□□ -0.51
SmoP56726 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Gm22711-201ENSMUST00000116890 133 ntBASIC11.85□□□□□ -0.51
SmoP56726 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.85□□□□□ -0.51
SmoP56726 Gm11956-201ENSMUST00000119525 512 ntBASIC11.85□□□□□ -0.51
SmoP56726 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Mir1943-201ENSMUST00000158276 73 ntBASIC11.85□□□□□ -0.51
SmoP56726 Gm24844-201ENSMUST00000158679 127 ntBASIC11.85□□□□□ -0.51
SmoP56726 Gm8459-201ENSMUST00000162504 760 ntBASIC11.85□□□□□ -0.51
SmoP56726 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.85□□□□□ -0.51
SmoP56726 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SmoP56726 Gm6108-201ENSMUST00000208365 367 ntBASIC11.85□□□□□ -0.51
SmoP56726 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.85□□□□□ -0.51
SmoP56726 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.85□□□□□ -0.51
SmoP56726 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.85□□□□□ -0.51
SmoP56726 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SmoP56726 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.85□□□□□ -0.51
SmoP56726 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.85□□□□□ -0.51
SmoP56726 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SmoP56726 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.84□□□□□ -0.51
SmoP56726 Gm14263-201ENSMUST00000117955 746 ntBASIC11.84□□□□□ -0.51
SmoP56726 Gm15573-201ENSMUST00000119487 540 ntBASIC11.84□□□□□ -0.51
SmoP56726 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Gm3150-201ENSMUST00000166418 204 ntBASIC11.84□□□□□ -0.51
SmoP56726 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Gm10807-201ENSMUST00000177134 795 ntBASIC11.84□□□□□ -0.51
SmoP56726 Gm5523-201ENSMUST00000180415 997 ntBASIC11.84□□□□□ -0.51
SmoP56726 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.84□□□□□ -0.51
SmoP56726 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.84□□□□□ -0.51
SmoP56726 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
SmoP56726 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SmoP56726 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SmoP56726 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SmoP56726 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SmoP56726 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SmoP56726 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
SmoP56726 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.83□□□□□ -0.52
SmoP56726 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SmoP56726 Gm15352-201ENSMUST00000118696 270 ntBASIC11.83□□□□□ -0.52
SmoP56726 Gm11700-201ENSMUST00000119409 403 ntBASIC11.83□□□□□ -0.52
SmoP56726 Gm4726-201ENSMUST00000135604 736 ntBASIC11.83□□□□□ -0.52
SmoP56726 Gm6019-201ENSMUST00000148369 736 ntBASIC11.83□□□□□ -0.52
SmoP56726 Gm9550-201ENSMUST00000161130 862 ntBASIC11.83□□□□□ -0.52
SmoP56726 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.83□□□□□ -0.52
SmoP56726 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.83□□□□□ -0.52
SmoP56726 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.83□□□□□ -0.52
SmoP56726 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.83□□□□□ -0.52
SmoP56726 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.83□□□□□ -0.52
SmoP56726 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms