Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox1P53783 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sox1P53783 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sox1P53783 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sox1P53783 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sox1P53783 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.08□□□□□ -0.48
Sox1P53783 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Sox1P53783 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox1P53783 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.07□□□□□ -0.48
Sox1P53783 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.07□□□□□ -0.48
Sox1P53783 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.07□□□□□ -0.48
Sox1P53783 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sox1P53783 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sox1P53783 Gm11993-201ENSMUST00000121861 820 ntBASIC12.07□□□□□ -0.48
Sox1P53783 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sox1P53783 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sox1P53783 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC12.07□□□□□ -0.48
Sox1P53783 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC12.07□□□□□ -0.48
Sox1P53783 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.07□□□□□ -0.48
Sox1P53783 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox1P53783 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox1P53783 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox1P53783 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.06□□□□□ -0.48
Sox1P53783 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.06□□□□□ -0.48
Sox1P53783 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.06□□□□□ -0.48
Sox1P53783 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox1P53783 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox1P53783 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox1P53783 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Sox1P53783 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox1P53783 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox1P53783 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.06□□□□□ -0.48
Sox1P53783 Gm14247-201ENSMUST00000120950 237 ntBASIC12.06□□□□□ -0.48
Sox1P53783 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox1P53783 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox1P53783 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox1P53783 Gm26976-201ENSMUST00000182929 908 ntBASIC12.06□□□□□ -0.48
Sox1P53783 Gm5190-201ENSMUST00000192434 357 ntBASIC12.06□□□□□ -0.48
Sox1P53783 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox1P53783 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox1P53783 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.06□□□□□ -0.48
Sox1P53783 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.06□□□□□ -0.48
Sox1P53783 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox1P53783 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox1P53783 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox1P53783 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms