Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
RoraP51448 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RoraP51448 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.21□□□□□ -0.61
RoraP51448 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
RoraP51448 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
RoraP51448 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
RoraP51448 Gm15610-201ENSMUST00000120584 195 ntBASIC11.21□□□□□ -0.61
RoraP51448 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.21□□□□□ -0.61
RoraP51448 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
RoraP51448 Gm3508-201ENSMUST00000186012 792 ntBASIC11.21□□□□□ -0.61
RoraP51448 Gm10774-201ENSMUST00000188689 204 ntBASIC11.21□□□□□ -0.61
RoraP51448 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RoraP51448 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.21□□□□□ -0.61
RoraP51448 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.21□□□□□ -0.61
RoraP51448 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.21□□□□□ -0.61
RoraP51448 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.21□□□□□ -0.61
RoraP51448 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.21□□□□□ -0.62
RoraP51448 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RoraP51448 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.2□□□□□ -0.62
RoraP51448 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RoraP51448 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RoraP51448 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.2□□□□□ -0.62
RoraP51448 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
RoraP51448 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.2□□□□□ -0.62
RoraP51448 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.2□□□□□ -0.62
RoraP51448 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
RoraP51448 Mir6546-201ENSMUST00000184460 62 ntBASIC11.2□□□□□ -0.62
RoraP51448 Mir7686-201ENSMUST00000200604 57 ntBASIC11.2□□□□□ -0.62
RoraP51448 Gm5051-201ENSMUST00000204085 485 ntBASIC11.2□□□□□ -0.62
RoraP51448 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.2□□□□□ -0.62
RoraP51448 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.2□□□□□ -0.62
RoraP51448 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
RoraP51448 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
RoraP51448 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
RoraP51448 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
RoraP51448 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
RoraP51448 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RoraP51448 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RoraP51448 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.19□□□□□ -0.62
RoraP51448 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RoraP51448 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms