Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm16177-201ENSMUST00000120728 718 ntBASIC9.76□□□□□ -0.85
Nkx2-1P50220 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Gm5706-201ENSMUST00000181525 993 ntBASIC9.76□□□□□ -0.85
Nkx2-1P50220 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm24934-201ENSMUST00000103764 111 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm12502-201ENSMUST00000120197 444 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm7029-201ENSMUST00000173226 450 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm8602-201ENSMUST00000184045 607 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.75□□□□□ -0.85
Nkx2-1P50220 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nkx2-1P50220 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms