Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh4P39038 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh4P39038 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh4P39038 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.33□□□□□ -0.6
Cdh4P39038 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.33□□□□□ -0.6
Cdh4P39038 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Cdh4P39038 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Cdh4P39038 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh4P39038 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Cdh4P39038 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Cdh4P39038 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdh4P39038 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.32□□□□□ -0.6
Cdh4P39038 Gm11509-201ENSMUST00000117358 325 ntBASIC11.32□□□□□ -0.6
Cdh4P39038 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdh4P39038 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdh4P39038 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh4P39038 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.32□□□□□ -0.6
Cdh4P39038 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.32□□□□□ -0.6
Cdh4P39038 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.32□□□□□ -0.6
Cdh4P39038 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.32□□□□□ -0.6
Cdh4P39038 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdh4P39038 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdh4P39038 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.32□□□□□ -0.6
Cdh4P39038 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh4P39038 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Cdh4P39038 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdh4P39038 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh4P39038 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdh4P39038 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh4P39038 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Gm23200-201ENSMUST00000104379 132 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Gm12857-201ENSMUST00000117678 592 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Gm12196-201ENSMUST00000120954 262 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Gm25881-201ENSMUST00000157783 103 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Gm28686-201ENSMUST00000187404 609 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 AU022133-201ENSMUST00000200601 873 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Gm9797-202ENSMUST00000218003 294 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdh4P39038 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdh4P39038 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Cdh4P39038 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.31□□□□□ -0.6
Cdh4P39038 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.31□□□□□ -0.6
Cdh4P39038 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh4P39038 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms