Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.62□□□□□ -0.87
Sdc1P18828 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.62□□□□□ -0.87
Sdc1P18828 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Sdc1P18828 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Sdc1P18828 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.62□□□□□ -0.87
Sdc1P18828 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Sdc1P18828 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.62□□□□□ -0.87
Sdc1P18828 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.62□□□□□ -0.87
Sdc1P18828 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sdc1P18828 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Sdc1P18828 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Sdc1P18828 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.61□□□□□ -0.87
Sdc1P18828 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sdc1P18828 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.61□□□□□ -0.87
Sdc1P18828 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sdc1P18828 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sdc1P18828 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.61□□□□□ -0.87
Sdc1P18828 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.61□□□□□ -0.87
Sdc1P18828 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Gm5264-201ENSMUST00000190584 848 ntBASIC9.61□□□□□ -0.87
Sdc1P18828 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.61□□□□□ -0.87
Sdc1P18828 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.61□□□□□ -0.87
Sdc1P18828 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Lect2-202ENSMUST00000225183 823 ntBASIC9.61□□□□□ -0.87
Sdc1P18828 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sdc1P18828 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Sdc1P18828 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sdc1P18828 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sdc1P18828 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sdc1P18828 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sdc1P18828 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sdc1P18828 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sdc1P18828 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sdc1P18828 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sdc1P18828 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.6□□□□□ -0.87
Sdc1P18828 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.6□□□□□ -0.87
Sdc1P18828 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms