Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm24136-201ENSMUST00000083374 165 ntBASIC8.61□□□□□ -1.03
TcraP01849 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC8.61□□□□□ -1.03
TcraP01849 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Gm43931-201ENSMUST00000204817 2870 ntBASIC8.61□□□□□ -1.03
TcraP01849 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
TcraP01849 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
TcraP01849 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC8.61□□□□□ -1.03
TcraP01849 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC8.61□□□□□ -1.03
TcraP01849 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Gm45501-201ENSMUST00000211468 2526 ntBASIC8.6□□□□□ -1.03
TcraP01849 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC8.6□□□□□ -1.03
TcraP01849 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TcraP01849 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Gm8213-201ENSMUST00000118191 441 ntBASIC8.6□□□□□ -1.03
TcraP01849 Gm14928-201ENSMUST00000120198 477 ntBASIC8.6□□□□□ -1.03
TcraP01849 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Gm26185-201ENSMUST00000157692 266 ntBASIC8.6□□□□□ -1.03
TcraP01849 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC8.6□□□□□ -1.03
TcraP01849 Gm37922-201ENSMUST00000195596 455 ntBASIC8.6□□□□□ -1.03
TcraP01849 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC8.6□□□□□ -1.03
TcraP01849 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC8.6□□□□□ -1.03
TcraP01849 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC8.6□□□□□ -1.03
TcraP01849 Gm9908-201ENSMUST00000211534 448 ntBASIC8.6□□□□□ -1.03
TcraP01849 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TcraP01849 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
TcraP01849 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 Gm43014-201ENSMUST00000198568 2443 ntBASIC8.6□□□□□ -1.03
TcraP01849 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TcraP01849 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TcraP01849 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
TcraP01849 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Gm13437-201ENSMUST00000122434 1981 ntBASIC8.59□□□□□ -1.03
TcraP01849 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
TcraP01849 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC8.59□□□□□ -1.03
TcraP01849 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TcraP01849 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms