Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.95□□□□□ -0.82
Prrt1O35449 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.95□□□□□ -0.82
Prrt1O35449 Gm27701-201ENSMUST00000184498 110 ntBASIC9.95□□□□□ -0.82
Prrt1O35449 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.95□□□□□ -0.82
Prrt1O35449 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Gm17931-201ENSMUST00000208132 634 ntBASIC9.95□□□□□ -0.82
Prrt1O35449 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Prrt1O35449 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.95□□□□□ -0.82
Prrt1O35449 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Prrt1O35449 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Prrt1O35449 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Prrt1O35449 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Prrt1O35449 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Prrt1O35449 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Prrt1O35449 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Prrt1O35449 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Prrt1O35449 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Prrt1O35449 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Prrt1O35449 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Prrt1O35449 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Prrt1O35449 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Prrt1O35449 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.94□□□□□ -0.82
Prrt1O35449 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.94□□□□□ -0.82
Prrt1O35449 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Prrt1O35449 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Gm14247-201ENSMUST00000120950 237 ntBASIC9.94□□□□□ -0.82
Prrt1O35449 Gm13342-201ENSMUST00000121055 207 ntBASIC9.94□□□□□ -0.82
Prrt1O35449 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Prrt1O35449 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.94□□□□□ -0.82
Prrt1O35449 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC9.94□□□□□ -0.82
Prrt1O35449 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Gm27023-201ENSMUST00000182372 285 ntBASIC9.94□□□□□ -0.82
Prrt1O35449 Gm6114-201ENSMUST00000182472 968 ntBASIC9.94□□□□□ -0.82
Prrt1O35449 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Prrt1O35449 Gm44855-201ENSMUST00000205725 362 ntBASIC9.94□□□□□ -0.82
Prrt1O35449 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.94□□□□□ -0.82
Prrt1O35449 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.94□□□□□ -0.82
Prrt1O35449 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.94□□□□□ -0.82
Prrt1O35449 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.94□□□□□ -0.82
Prrt1O35449 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prrt1O35449 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.93□□□□□ -0.82
Prrt1O35449 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prrt1O35449 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.93□□□□□ -0.82
Prrt1O35449 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prrt1O35449 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prrt1O35449 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prrt1O35449 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prrt1O35449 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prrt1O35449 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms