Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Gm12015-201ENSMUST00000117065 843 ntBASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Gm14208-201ENSMUST00000119645 678 ntBASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Gm32999-201ENSMUST00000192693 562 ntBASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Gm19187-201ENSMUST00000206781 892 ntBASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Gm8420-201ENSMUST00000097103 598 ntBASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm13996-201ENSMUST00000118456 430 ntBASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Mir6927-201ENSMUST00000184494 71 ntBASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm42937-201ENSMUST00000197360 752 ntBASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm8913-201ENSMUST00000209491 641 ntBASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tubb3Q9ERD7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gm43138-201ENSMUST00000199123 708 ntBASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms