Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.72□□□□□ -0.85
Prpf8Q99PV0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.72□□□□□ -0.85
Prpf8Q99PV0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Prpf8Q99PV0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Gm4879-201ENSMUST00000122190 1272 ntBASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Gm18159-201ENSMUST00000174516 1070 ntBASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Gm7902-201ENSMUST00000198842 947 ntBASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Gm44882-201ENSMUST00000205702 802 ntBASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Gm19009-201ENSMUST00000223072 823 ntBASIC9.71□□□□□ -0.85
Prpf8Q99PV0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Prpf8Q99PV0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Prpf8Q99PV0 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms