Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc9Q8VC31 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc9Q8VC31 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc9Q8VC31 AC156802.2-203ENSMUST00000226032 1906 ntBASIC14.21□□□□□ -0.14
Ccdc9Q8VC31 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc9Q8VC31 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.21□□□□□ -0.14
Ccdc9Q8VC31 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.21□□□□□ -0.14
Ccdc9Q8VC31 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc9Q8VC31 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc9Q8VC31 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Mir686-201ENSMUST00000102174 109 ntBASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Gm12384-201ENSMUST00000119228 919 ntBASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Gm42612-201ENSMUST00000197986 623 ntBASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Gm43170-201ENSMUST00000199827 612 ntBASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Gm19078-201ENSMUST00000206311 727 ntBASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc9Q8VC31 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm12403-201ENSMUST00000121384 959 ntBASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm43094-201ENSMUST00000196549 921 ntBASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm44882-201ENSMUST00000205702 802 ntBASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Gm10417-201ENSMUST00000194341 3522 ntBASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc9Q8VC31 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc9Q8VC31 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc9Q8VC31 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc9Q8VC31 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc9Q8VC31 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc9Q8VC31 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc9Q8VC31 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc9Q8VC31 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc9Q8VC31 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms