Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm6867-201ENSMUST00000219165 425 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Gm10288-201ENSMUST00000084614 537 ntBASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nlrc4Q3UP24 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nlrc4Q3UP24 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Nlrc4Q3UP24 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.46□□□□□ -0.42
Nlrc4Q3UP24 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nlrc4Q3UP24 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.46□□□□□ -0.42
Nlrc4Q3UP24 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nlrc4Q3UP24 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nlrc4Q3UP24 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Nlrc4Q3UP24 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Gm13461-201ENSMUST00000120980 662 ntBASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Gm11960-201ENSMUST00000122068 925 ntBASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Gm5714-201ENSMUST00000197343 566 ntBASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.45□□□□□ -0.42
Nlrc4Q3UP24 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 B9d1os-201ENSMUST00000137010 674 ntBASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Gm23085-201ENSMUST00000157849 293 ntBASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Gm26461-201ENSMUST00000175064 290 ntBASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.44□□□□□ -0.42
Nlrc4Q3UP24 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms