Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm16470-201ENSMUST00000182456 998 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm3527-201ENSMUST00000198905 460 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm37651-201ENSMUST00000194679 1494 ntBASIC6.02□□□□□ -1.44
Ush2AQ2QI47 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.44
Ush2AQ2QI47 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm7910-201ENSMUST00000117896 835 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm22481-201ENSMUST00000122562 192 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 AC155300.1-201ENSMUST00000219134 480 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm6682-201ENSMUST00000169666 1346 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Acot6-202ENSMUST00000222921 3622 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm14231-201ENSMUST00000120090 592 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm5543-201ENSMUST00000193329 1091 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm8171-201ENSMUST00000217443 720 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm42858-201ENSMUST00000202512 1704 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm11621-201ENSMUST00000118253 589 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm5389-201ENSMUST00000120893 1176 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm18862-201ENSMUST00000204643 933 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Gm10617-201ENSMUST00000098368 1172 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC6.02□□□□□ -1.45
Ush2AQ2QI47 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Btg4-201ENSMUST00000114431 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm16288-201ENSMUST00000137940 367 ntBASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Mir7058-201ENSMUST00000184637 75 ntBASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 AC167019.2-201ENSMUST00000227335 845 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms